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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015800090.1_cds_XP_016467997.1_6021
CDS Infomation

[gene=LOC107790555] [db_xref=GeneID:107790555] [protein=shewanella-like protein phosphatase 1] [protein_id=XP_016467997.1] [location=join(13866..14076,14432..14532,14863..14976,15168..15380,15804..15939,16034..16206,16430..16518,16705..16774,16992..17078)] [gbkey=CDS]
Sequence

ATGGCTACTGTTGCACTAACATGTTCTTTACCACTTCAACCACCTTCTGCTTCTTCACAA
TCACAGTCCCGCAAATTGGTTGATACGATTGTTTCAACTCCAGCTCAGTATAGCAGTAGC
AGTACTAATAGCTATGGAAGCTTAAAACCCATTGTAGTAAATGGGGACCCGCACACTTTC
GTTTCAGCTCCGGGTCGTCGAATTGTCGCGGTCGGAGATTTGCATGGAGATCTTGACAAG
GCAAGAGGTGCACTTGAGACGGCTGGTGTGCTGAGTTCTGATGGTCAAGATTTCTGGATT
GGCGGTGAGACGGTGTTGATTCAGCTTGGAGATATACTTGACCGAGGTGAAGATGAACTT
GCAATTTTATCATTGTTGAAGTCACTAGACATCCAAGCAAAAGCTCATGGTGGAGCAGTT
TTCCAGGTCAATGGAAATCATGAAACTATGAATGTAGAGGGGGACTTCAGATATGTTGAC
AATGGGGGACTTGACGAGTGTATAGACTTTCTGGATTACTTGGAGGAATGTGAACACAAC
TGGGAAGAAGCTTTTGTCAGTTGGTGTGCTGTGTCTGGCAGATGGAAACAAGATCGGAAG
GTGTCTCAAAATTATTGGGCTCCATGGAATTTGGTAAAGCGGCAAAAGGGTGTAATTGCA
AGATCAATCCTCATGAGACCCGGAGGTCCATTGGCATGTGAGTTGGCACGTCATGGTGTT
GTTCTTAAGGTTGATGATTGGCTCTTCTGCCATGGTGGCCTTCTTCCTCATCATGTTGCC
TATGGTTTAGAGAGATTGAATAGAGAAGTATCTCAATGGATGAAAGGTCCGAGTGAAGCT
GACGATTCTCCGCAGATGCCTTTCATAGCCACCAGGGGCTATGATAGTATCGTGTGGAAC
CGTTTGTACTCCAGAGATTCAGATCTGGAAGACTACCAGATCGAGCAGATCCAATCTCTT
CTTGAAGAGACACTGCAAACTGTGGGTGCCAAAGCGATGGTTGTAGGGCATACTCCTCAA
CCTATGGGGGTGAATTGCAAATACAACTGTAGCATATGGCGAATTGATGTGGGAATGTCT
AGTGGAGTACTTGGCTCGAGCCCTGAGGTCCTAGAAATAAGAGATAATAAAGCTAGAGCC
CTAAGGAGCACAAGGGATTGGTCCAGTGAACTTCAGGTTGCTGATTACACGTAG

Peptide Sequence

PEP ID

XP_016467997.1
PEP Infomation

PREDICTED: shewanella-like protein phosphatase 1 [Nicotiana tabacum]
Sequence

MATVALTCSLPLQPPSASSQSQSRKLVDTIVSTPAQYSSSSTNSYGSLKPIVVNGDPHTF
VSAPGRRIVAVGDLHGDLDKARGALETAGVLSSDGQDFWIGGETVLIQLGDILDRGEDEL
AILSLLKSLDIQAKAHGGAVFQVNGNHETMNVEGDFRYVDNGGLDECIDFLDYLEECEHN
WEEAFVSWCAVSGRWKQDRKVSQNYWAPWNLVKRQKGVIARSILMRPGGPLACELARHGV
VLKVDDWLFCHGGLLPHHVAYGLERLNREVSQWMKGPSEADDSPQMPFIATRGYDSIVWN
RLYSRDSDLEDYQIEQIQSLLEETLQTVGAKAMVVGHTPQPMGVNCKYNCSIWRIDVGMS
SGVLGSSPEVLEIRDNKARALRSTRDWSSELQVADYT

Transcript Sequence

Gene sequence data has not been registered.